CDS
| Accession Number | TCMCG057C52689 |
| gbkey | CDS |
| Protein Id | XP_018458422.1 |
| Location | complement(join(5006..5132,5220..5703,5775..6042,6131..6191,6279..6334,6412..6471,6558..6628,6721..6840,6925..7028,7150..7289,7606..7671,7764..7814,7919..8032)) |
| Gene | LOC108829257 |
| GeneID | 108829257 |
| Organism | Raphanus sativus |
Protein
| Length | 573aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018602920.1 |
| Definition | PREDICTED: small RNA degrading nuclease 5-like isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | Small RNA degrading nuclease |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14570
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTCGTCTTTGAAGCGTAAGCACGACGCCGTGGAAGACAATCTTGATTGTGGAGAAAGCGCCGACGGTGTTGATAATAAGACCAACGGTTTCTTCGATGTATATGGACCGGAAGCGAAACCAGAACTCGTTTTCAACACTCCGGACATAACATTGAACTTACAAGATGTTCAGGGACTTGTCACATGGGTTATTGGAGAAGGCTATATGCCCTCGTGGGTATTCATCAAGAATAAGCCTCTAATTCCAAAGGTTGTCTTGCTCTACCTCCCTGGATTGGATGCTGCTCTGTACTTATCACAGTCTAAAGCACTTGCTAGGTTGAAATCTTGTTGTGGCAATCCTGTACCGCTTTTAGCTTTGAGGTTGGTTTGTGCAGTTGATGAGATGAAGACAGTAGATACCATCCTTACTTGCAGGGGTAAGAAGAAGAAAAGTGCTACTAGTCCAATGGAACCACCTCTATCTAAGCCAGAAGCATGTAATCTGACCGGGAAGACCTTCATTGAGCTCACAAAAGATATACCGTTCCCTGTTGCATACTACACTCTAAGTCGAAAGGAAATGGAACAAAATGGATACAAGTTTGAGACGGAGTTTGTTTCTACACTTCCTGCACCGTCAGGATCATGTCCCCGTGAAATTTTGGCTCTTGATTGCGAGATGTGTATTACAAAGGATGGTTTTGAATTGACAAGAGTGACACTGGTTGATATAGAAGGACAGGTTCTTCTAGATAAACTAGTCAAGCCAACAAATCTTATTACTGATTACAATACAAGGTATAGCGGAATAACAGCTGAGATGATGGAGGGGGTAACAACAACCCTTAGATATATTCAGGAAGAGTTCTTGAAGCTGGTTTTCAAAGAGACAGTACTAGTAGGACACTCTTTGGAGAATGACTTGGTTTCTCTGAAGATCTCTCATAACCTAGTGATTGACACTGCAGTGCTCTACAAGCATCCACGTGGTGGTTCTTACAAAACCAAACTTCGGATTCTAGCCAAAAAGTTTCTCGCTAGAGAGATACAAATGTCTGAATCTGGACATGACAGCGTCGAGGATGCAAAGGCAGCCATGGATTTGGCACTAATGAAGATAAAATACGGACCTGAGTTCGGTTCACCACCTGAGATGATAAGAAAGAGACTCCTCAACGTTTTGAATGAGAGCGAGAAAGCCACTTCTATCGTGGACAGCATCAACATCGTGAAGCGGTATGCTTCTGAGTCATCAAATGCAATTCCAGTATGTGATGATGATGAAGCACTTTCAAAGGCCATGAAAGAGGTAAAGAACAGGCGGTCGCAGTTTGTTTGGACACAGTTCTCAGAACTGAACACACATTTCCAGAGGAGAGCGGATGATCCAGAGAAACTAAACTCAAGACTAGCAAAGATGATCTCATTACAGACATGTAGTAGCGATGCTTCAGCCGGTCCTGAGAAACGTCCCAAAAGCAAAGTCTCAGCTGAAACTAAGGTGATCTTGAAGAAAATGGATGAAAGAGTCCATGCCCTTCACGCTGCATTACCTACCAATGCAATGTTTATAGTTTGCACTGGACATGGAGACACGTCCATTGTACACAGGGTGAGGAAAATGCTAAGAGATGAGAAGAGTGAGATTGGGTTTAGCCGTGAGAAAGTTGTGAAGGTTCTTGAAGAGCTTCAAGCACAAGCTGAAGTAGCTCTCTGTTTTGTAGGTATCAAGCAATAA |
| Protein: MSSLKRKHDAVEDNLDCGESADGVDNKTNGFFDVYGPEAKPELVFNTPDITLNLQDVQGLVTWVIGEGYMPSWVFIKNKPLIPKVVLLYLPGLDAALYLSQSKALARLKSCCGNPVPLLALRLVCAVDEMKTVDTILTCRGKKKKSATSPMEPPLSKPEACNLTGKTFIELTKDIPFPVAYYTLSRKEMEQNGYKFETEFVSTLPAPSGSCPREILALDCEMCITKDGFELTRVTLVDIEGQVLLDKLVKPTNLITDYNTRYSGITAEMMEGVTTTLRYIQEEFLKLVFKETVLVGHSLENDLVSLKISHNLVIDTAVLYKHPRGGSYKTKLRILAKKFLAREIQMSESGHDSVEDAKAAMDLALMKIKYGPEFGSPPEMIRKRLLNVLNESEKATSIVDSINIVKRYASESSNAIPVCDDDEALSKAMKEVKNRRSQFVWTQFSELNTHFQRRADDPEKLNSRLAKMISLQTCSSDASAGPEKRPKSKVSAETKVILKKMDERVHALHAALPTNAMFIVCTGHGDTSIVHRVRKMLRDEKSEIGFSREKVVKVLEELQAQAEVALCFVGIKQ |